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dependency graph: do not show extras as separate nodes

Stefano Zacchiroli requested to merge generated-differential-D2029-source into generated-differential-D2029-target

Currently, the dependency graph shows different nodes for, e.g., "swh.core" and "swh.core[db]". With this change the two nodes are merged together.

While it is interesting to know which precise part of a module others depend on, that is not the purpose of the dependency graph, which is meant to give only a high-level view of dependencies.

Migrated from D2029 (view on Phabricator)

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